Motif View

Internal ID 18233733
Source Database TransTermHP TERM 2
Feature Type terminator
Name
Rho-independent transcription terminator TERM 2
Sequence CGCGCCTCACTTCGCTGAGGCGCG
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Start 17898
End 17921
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE13757 AZPAE13757_contig_18, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCCGCACGACCCG(5' tail) CGCGCCTCA(5' stem) CTTCGC(loop) TGAGGCGCG(3' stem) TTTTTCGTTCTACCC(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685