| Internal ID | 18233567 | Source Database | TransTermHP TERM 40 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 40
|
| Sequence |
GGAACGAAGAACCCCGGCCATGAGCCGGGGTTCTTCGTTCC Look for more occurrences |
| Start | 179539 |
| End | 179579 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE13757 AZPAE13757_contig_13, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGCTTTCAGCAATCA(5' tail) GGAACGAAGAACCCCGGC(5' stem) TCATG(loop) GCCGGGGTTCTTCGTTCC(3' stem) ATCTCAGGCGGCGCA(3' tail). Confidence: 100. opp_overlap 179543 179547 179550, overlap 179543 179547 179550 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|