Motif View

Internal ID 18215837
Source Database TransTermHP TERM 13
Feature Type terminator
Name
Rho-independent transcription terminator TERM 13
Sequence GCCCCGCGATGCGGGGC
Look for more occurrences
Start 68950
End 68966
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14373 AZPAE14373_contig_20, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCCGAATACGAAGAA(5' tail) GCCCCGC(5' stem) ATC(loop) GCGGGGC(3' stem) TTTCTCTTGGCCGTT(3' tail). Confidence: 91. opp_overlap 68950

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685