Motif View

Internal ID 18209573
Source Database TransTermHP TERM 97
Feature Type terminator
Name
Rho-independent transcription terminator TERM 97
Sequence GGCGTCCTGCTGGCAACAGCGGGACGCC
Look for more occurrences
Start 368800
End 368827
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14395 AZPAE14395_contig_4, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGCGCAAACAAAAAA(5' tail) GGCGTCCCGCTG(5' stem) TTGC(loop) CAGCAGGACGCC(3' stem) TTTGTCCAGGTCCCG(3' tail). Confidence: 100. opp_overlap 368800

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685