Motif View

Internal ID 18208013
Source Database TransTermHP TERM 96
Feature Type terminator
Name
Rho-independent transcription terminator TERM 96
Sequence GGGCGTCCTTCCGGACGCCC
Look for more occurrences
Start 525881
End 525900
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14402 AZPAE14402_contig_1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CCATGATCATCTTCA(5' tail) GGGCGTCC(5' stem) TTCC(loop) GGACGCCC(3' stem) TTCTTTTATCCCCCT(3' tail). Confidence: 100. overlap 525878

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685