Internal ID | 18205962 | Source Database | TransTermHP TERM 35 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 35
|
Sequence |
CCCGCCACCGGTTCCCTGGTTTCCGGTCGGCGGG Look for more occurrences |
Start | 111828 |
End | 111861 |
Strand | - |
Genomic Context | |
Replicon | Pseudomonas aeruginosa strain AZPAE14410 AZPAE14410_contig_1, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | GACGGGCATAAAAAA(5' tail) CCCGCCGACCGG(5' stem) AAACCAGGGAA(loop) CCGGT-GGCGGG(3' stem) TGAAGACGGGATCGG(3' tail). Confidence: 100. gap 1 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|