Motif View

Internal ID 18196674
Source Database TransTermHP TERM 23
Feature Type terminator
Name
Rho-independent transcription terminator TERM 23
Sequence CATGGCGTTACGCTATCG
Look for more occurrences
Start 190572
End 190589
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14453 AZPAE14453_contig_1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAAGGAAATAAAAAA(5' tail) CGATAGCG(5' stem) TAA(loop) CGCCAT-G(3' stem) ATCCGCAGGGCTTCC(3' tail). Confidence: 100. gap 1, overlap 190573 190575 190577

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685