Motif View

Internal ID 18196673
Source Database TransTermHP TERM 22
Feature Type terminator
Name
Rho-independent transcription terminator TERM 22
Sequence CGCGCCTCACTTCGCTGAGGCGCG
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Start 189499
End 189522
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14453 AZPAE14453_contig_1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGGTAGAACGAAAAA(5' tail) CGCGCCTCA(5' stem) GCGAAG(loop) TGAGGCGCG(3' stem) CGGGTCGTGCGGGCG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685