Motif View

Internal ID 18196671
Source Database TransTermHP TERM 20
Feature Type terminator
Name
Rho-independent transcription terminator TERM 20
Sequence CGGCGCATCCCCAACGGGATGCGCCG
Look for more occurrences
Start 176934
End 176959
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE14453 AZPAE14453_contig_1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AACCGCTGAAGCGTA(5' tail) CGGCGCATCCC(5' stem) CAAC(loop) GGGATGCGCCG(3' stem) TTTTCACATCGGCCG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685