| Internal ID | 18191822 | Source Database | TransTermHP TERM 11 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 11
|
| Sequence |
GGCGGCGCCCTCTCTTTCCCCTGGGAAAGCGGGGGCGTCGCC Look for more occurrences |
| Start | 87545 |
| End | 87586 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE14526 AZPAE14526_contig_12, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GCCTTTCCACACCCT(5' tail) GGCGGCGCCCTCTCTTTCC(5' stem) CCTG(loop) GGAAAGCGGGGGCGTCGCC(3' stem) GTTTCCGGAGCTATC(3' tail). Confidence: 100. opp_overlap 87574, overlap 87544 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|