Motif View

Internal ID 18183301
Source Database TransTermHP TERM 10
Feature Type terminator
Name
Rho-independent transcription terminator TERM 10
Sequence GGGTTCCGGCGCCAGCCGGAACCC
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Start 61464
End 61487
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_30, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTGTCGGGTGGAAAA(5' tail) GGGTTCCGGC(5' stem) TGGC(loop) GCCGGAACCC(3' stem) CTGGGCCAGGATCAG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685