| Internal ID | 18182879 | Source Database | TransTermHP TERM 46 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 46
|
| Sequence |
GGAAACCCCGGCCTGGCGCCGGGGTTTTC Look for more occurrences |
| Start | 233121 |
| End | 233149 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE12140 AZPAE12140_contig_12, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CAGACCGACCCTCAT(5' tail) GGAAACCCCGGC(5' stem) CTGGC(loop) GCCGGGGTTTTC(3' stem) TTTTTGCGCCAGGTA(3' tail). Confidence: 100. opp_overlap 233126, overlap 233126 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|