| Internal ID | 18179416 | Source Database | TransTermHP TERM 17 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 17
|
| Sequence |
ACCACAGCGCCCGGGCCGGCTTCCAGCTGTCCCGGGCGTTTGTCGC Look for more occurrences |
| Start | 49454 |
| End | 49499 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE12145 AZPAE12145_contig_3, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GATGGCGAGTGCGTA(5' tail) ACCAC-AGCGCCCGGGCCGGCT(5' stem) TCC(loop) AGCTGTCCCGGGCGTTTGTCGC(3' stem) TTTTTTTTCCAGTGA(3' tail). Confidence: 100. gap 1, opp_overlap 49460, overlap 49461 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|