Motif View

Internal ID 18177260
Source Database TransTermHP TERM 120
Feature Type terminator
Name
Rho-independent transcription terminator TERM 120
Sequence GGCCGCATCCGCGGCC
Look for more occurrences
Start 401422
End 401437
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE12146 AZPAE12146_contig_2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATGAAAAATGCAAAA(5' tail) GGCCGC(5' stem) GGAT(loop) GCGGCC(3' stem) TTTTTTTTGGGGCGG(3' tail). Confidence: 95. opp_overlap 401422, overlap 401417 401415

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685