Internal ID | 18175445 | Source Database | TransTermHP TERM 73 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 73
|
Sequence |
CGCCGCACGCGGGAAGCCCTGGTCCTTGCCTTCCCGCGTGCGGCG Look for more occurrences |
Start | 240851 |
End | 240895 |
Strand | + |
Genomic Context | |
Replicon | Pseudomonas aeruginosa strain AZPAE12148 AZPAE12148_contig_5, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CTGGACTGATCGCTG(5' tail) CGCCGCACGCGGGAAGCCCTG(5' stem) GTC(loop) CTTGCCTTCCCGCGTGCGGCG(3' stem) TTATCGTTCGGCCGG(3' tail). Confidence: 100. |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|