Motif View

Internal ID 18175445
Source Database TransTermHP TERM 73
Feature Type terminator
Name
Rho-independent transcription terminator TERM 73
Sequence CGCCGCACGCGGGAAGCCCTGGTCCTTGCCTTCCCGCGTGCGGCG
Look for more occurrences
Start 240851
End 240895
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE12148 AZPAE12148_contig_5, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGGACTGATCGCTG(5' tail) CGCCGCACGCGGGAAGCCCTG(5' stem) GTC(loop) CTTGCCTTCCCGCGTGCGGCG(3' stem) TTATCGTTCGGCCGG(3' tail). Confidence: 100.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685