| Internal ID | 18172347 | Source Database | TransTermHP TERM 18 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 18
|
| Sequence |
CGCGCGGCCGGTGCAGCGATGCACCGGCCGCGTCG Look for more occurrences |
| Start | 87343 |
| End | 87377 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE12153 AZPAE12153_contig_3, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CAAGGCCTGAGTCTC(5' tail) CG-CGCGGCCGGTGCA(5' stem) GCGA(loop) TGCACCGGCCGCGTCG(3' stem) TCTTACCCGCAACAG(3' tail). Confidence: 100. gap 1, overlap 87345 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|