| Internal ID | 18166680 | Source Database | TransTermHP TERM 39 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 39
|
| Sequence |
GCGGCGCTCCGCTAGCGGAGCGCCAGC Look for more occurrences |
| Start | 101856 |
| End | 101882 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE12411 AZPAE12411_contig_44, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TTCAGTTGAACCATG(5' tail) GC-GGCGCTCCG(5' stem) CTAG(loop) CGGAGCGCCAGC(3' stem) TTTCCGACGAGCGCC(3' tail). Confidence: 90. gap 1, opp_overlap 101854 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|