| Internal ID | 18166111 |
| Source Database | TransTermHP TERM 118 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 118
|
| Sequence |
CGAAAAAGCCCGGCATTCGCCGGGCTTTTTCG Look for more occurrences |
| Start | 294470 |
| End | 294501 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE12411 AZPAE12411_contig_10, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GACCGCAGATTAAAA(5' tail) CGAAAAAGCCCGGC(5' stem) GAAT(loop) GCCGGGCTTTTTCG(3' stem) TGGTTCTGATCAGAC(3' tail). Confidence: 100. opp_overlap 294470 294467 294477, overlap 294477 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|