| Internal ID | 18158405 | Source Database | TransTermHP TERM 5 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 5
|
| Sequence |
CGCCCTGTGTTGCCCGTTTCCCCGCCAGGGGATGCCCGGCACGCAGGGCG Look for more occurrences |
| Start | 24967 |
| End | 25016 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_24, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGCGCCACGCCGCCA(5' tail) CGCCCTGTGTTGCC-CGTTTCCCC(5' stem) GCCA(loop) GGGGATGCCCGGCA-CGCAGGGCG(3' stem) TTTTCGTTGCATGTC(3' tail). Confidence: 100. overlap 24957 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|