| Internal ID | 18158345 | Source Database | TransTermHP TERM 5 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 5
|
| Sequence |
CGACGAAAGGCGCCCACGGGCGCCTTTTTTCG Look for more occurrences |
| Start | 59142 |
| End | 59173 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_22, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CTGAGCCGCTCCATA(5' tail) CGACGAAAGGCGCC(5' stem) CACG(loop) GGCGCCTTTTTTCG(3' stem) TTTCCTCTATTCGAG(3' tail). Confidence: 91. opp_overlap 59150, overlap 59150 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|