Motif View

Internal ID 18158034
Source Database TransTermHP TERM 103
Feature Type terminator
Name
Rho-independent transcription terminator TERM 103
Sequence CCCCCTGGCGGAGCGATCCGCCAGGGGG
Look for more occurrences
Start 367521
End 367548
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa strain AZPAE12417 AZPAE12417_contig_11, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GTCGGAAAAAAACAA(5' tail) CCCCCTGGCGGA(5' stem) TCGC(loop) TCCGCCAGGGGG(3' stem) CCGGGTCGACGCTTC(3' tail). Confidence: 100. overlap 367518

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685