| Internal ID | 18151693 | Source Database | TransTermHP TERM 9 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 9
|
| Sequence |
CACACAAAGGCCACCTTCGGGTGGCCTTTGTGCA Look for more occurrences |
| Start | 18495 |
| End | 18528 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas fluorescens EGD-AQ6 contig30, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TAACTGACGCTTCAC(5' tail) CACACAAAGGCCACC(5' stem) TTCG(loop) GGTGGCCTTTGTGCA(3' stem) TTCTGAAGTTGGTGA(3' tail). Confidence: 95. opp_overlap 18499 18503, overlap 18496 18499 18503 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|