Motif View

Internal ID 18151296
Source Database TransTermHP TERM 32
Feature Type terminator
Name
Rho-independent transcription terminator TERM 32
Sequence GGCCAACGTTTAAGCGTTGGCC
Look for more occurrences
Start 112283
End 112304
Strand +
Genomic Context
Replicon Pseudomonas fluorescens EGD-AQ6 contig14, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTACCCAATAAAAAA(5' tail) GGCCAACGT(5' stem) TTAA(loop) GCGTTGGCC(3' stem) TTTTTAGTTTGACGG(3' tail). Confidence: 100. opp_overlap 112283

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685