Motif View

Internal ID 18148858
Source Database TransTermHP TERM 72
Feature Type terminator
Name
Rho-independent transcription terminator TERM 72
Sequence GCGTTCCCACGCAGAGCGTGGGAACGA
Look for more occurrences
Start 372752
End 372778
Strand -
Genomic Context
Replicon Pseudomonas fluorescens strain AU6308 Scaffold_190, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGTCTTGTCTATAGA(5' tail) TCGTTCCCACGC(5' stem) TCT(loop) GCGTGGGAACGC(3' stem) TGCCCTGGACGCTCT(3' tail). Confidence: 93.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685