Motif View

Internal ID 18146878
Source Database TransTermHP TERM 74
Feature Type terminator
Name
Rho-independent transcription terminator TERM 74
Sequence GGTGGGAGCTGGCGTGCCATCGCAGGCAGGCCAGCTCCCAGC
Look for more occurrences
Start 341946
End 341987
Strand -
Genomic Context
Replicon Pseudomonas fluorescens strain AU10973 Scaffold_200, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCACCAAAAATCAAG(5' tail) GCTGGGAGCTGGCCTGCC(5' stem) TGCGAT(loop) GGCACGCCAGCTCCCACC(3' stem) TGTCGATCGTGCACA(3' tail). Confidence: 100. overlap 341945 341941

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685