| Internal ID | 18143647 | Source Database | TransTermHP TERM 42 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 42
|
| Sequence |
GGGCGCAAAAAAACCGGCTGATATAGCCGGTTTTTTTATACCC Look for more occurrences |
| Start | 125053 |
| End | 125095 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas fluorescens strain C2 contig_20, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AAACTCTCACATCAA(5' tail) GGGTATAAAAAAACCGGCTA(5' stem) TAT(loop) CAGCCGGTTTTTTTGCGCCC(3' stem) GAAAAAAACTTATGC(3' tail). Confidence: 95. opp_overlap 125066 125082, overlap 125066 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|