| Internal ID | 18143611 | Source Database | TransTermHP TERM 66 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 66
|
| Sequence |
AGCCTGCGGCAGCTCCTACATGGGATTGAGTTTCCCTGTAGGAGCTGCCGCAGGCTGCG Look for more occurrences |
| Start | 309876 |
| End | 309934 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas fluorescens strain C2 contig_2, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GAAAGCAAAGATCGC(5' tail) ---AGCCTGCGGCAGCTCCTACATGGGA(5' stem) TTGAGTT(loop) TCCC-TGTAGGAGCTGCCGCAGGCTGCG(3' stem) ATCTTTTGATCTTGA(3' tail). Confidence: 90. gap 4, opp_overlap 309872 309873, overlap 309889 309923 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|