| Internal ID | 18143610 | Source Database | TransTermHP TERM 65 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 65
|
| Sequence |
AGCCTGCGGCAGCTCCTACAGGGAAACTCAATCCCATGTAGGAGCTGCCGCAGGCTGCG Look for more occurrences |
| Start | 309873 |
| End | 309931 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas fluorescens strain C2 contig_2, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TCTGAAAGCAAAGAT(5' tail) CGCAGCCTGCGGCAGCTCCTACATGGGA(5' stem) TTGAGTT(loop) TCCC-TGTAGGAGCTGCCGCAGGCT---(3' stem) GCGATCTTTTGATCT(3' tail). Confidence: 90. gap 4, opp_overlap 309876 309889 309923, overlap 309865 309872 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|