| Internal ID | 18138569 | Source Database | TransTermHP TERM 361 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 361
|
| Sequence |
CGAAACGGGGCACCCTGCTGACAGGGTGCCCCGTTTTG Look for more occurrences |
| Start | 1537764 |
| End | 1537801 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas mendocina EGD-AQ5 contig1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | GGCAGCCTGATCCAA(5' tail) CGAAACGGGGCACCCTG(5' stem) CTGA(loop) CAGGGTGCCCCGTTTTG(3' stem) TCTTTCAGGATGGGC(3' tail). Confidence: 100. opp_overlap 1537764 1537769, overlap 1537762 1537769 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|