| Internal ID | 18133772 | Source Database | TransTermHP TERM 40 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 40
|
| Sequence |
GCCGGTGCCGCCGTCAGTCCGAGCAGTCGGGCGGCTACCGGC Look for more occurrences |
| Start | 123212 |
| End | 123253 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas nitroreducens strain Aramco J contig12, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CGGCTCGAAGCGCAT(5' tail) GCCGGT-GCCGCC-GTCAGT(5' stem) CCGA(loop) GCAGTCGGGCGGCTACCGGC(3' stem) TTTTTCATGCCGGAG(3' tail). Confidence: 100. gap 2 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|