| Internal ID | 18129793 | Source Database | TransTermHP TERM 1174 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 1174
|
| Sequence |
TGCATAACCAATGTGGGAGCGGCGCACCGCCGCTCCCACATTTGGTTTTGCG Look for more occurrences |
| Start | 5481655 |
| End | 5481706 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas simiae strain WCS417. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGTTCTAAGCAACAC(5' tail) TGCATAACC-AATGTGGGAGCGGCG(5' stem) CAC(loop) CGCCGCTCCCACATTTGGTTTTGCG(3' stem) TGTATTCAGCTGTGG(3' tail). Confidence: 100. gap 1, opp_overlap 5481652 5481662 5481666, overlap 5481652 5481662 5481662 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|