Motif View

Internal ID 18125471
Source Database TransTermHP TERM 960
Feature Type terminator
Name
Rho-independent transcription terminator TERM 960
Sequence CGTTCCCACGCTCTGCGTGGGAATG
Look for more occurrences
Start 4436120
End 4436144
Strand +
Genomic Context
Replicon Pseudomonas sp. WCS374.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments ATCACCCTGTCTGAT(5' tail) CGTTCCCACGC(5' stem) TCT(loop) GCGTGGGAATG(3' stem) CTGTTTTGGACGCTC(3' tail). Confidence: 90. overlap 4436119 4436117 4436122

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685