Motif View

Internal ID 18125290
Source Database TransTermHP TERM 681
Feature Type terminator
Name
Rho-independent transcription terminator TERM 681
Sequence CCCCATGAGCGATCATGGGG
Look for more occurrences
Start 3034447
End 3034466
Strand -
Genomic Context
Replicon Pseudomonas sp. WCS374.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TGGGAACGAGAAAAA(5' tail) CCCCATGA(5' stem) TCGC(loop) TCATGGGG(3' stem) TTTTTCATTTTCAGC(3' tail). Confidence: 100. opp_overlap 3034447

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685