Motif View

Internal ID 18125260
Source Database TransTermHP TERM 637
Feature Type terminator
Name
Rho-independent transcription terminator TERM 637
Sequence CGGCGCTCACGGGCGCCG
Look for more occurrences
Start 2717181
End 2717198
Strand -
Genomic Context
Replicon Pseudomonas sp. WCS374.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CTGCGAACAAAAAAA(5' tail) CGGCGCC(5' stem) CGTG(loop) AGCGCCG(3' stem) TTTTTTATTATTTAA(3' tail). Confidence: 100. opp_overlap 2717174 2717181

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685