Motif View

Internal ID 18125108
Source Database TransTermHP TERM 418
Feature Type terminator
Name
Rho-independent transcription terminator TERM 418
Sequence CCGCTTCCCTCGCCGGAAGCGG
Look for more occurrences
Start 1696906
End 1696927
Strand -
Genomic Context
Replicon Pseudomonas sp. WCS374.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCAGGCATAAAAAAA(5' tail) CCGCTTCC(5' stem) GGCGAG(loop) GGAAGCGG(3' stem) TTTTCACACCCGCGC(3' tail). Confidence: 100. opp_overlap 1696906

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685