| Internal ID | 18124551 | Source Database | TransTermHP TERM 8 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 8
|
| Sequence |
GAACGAAAAACGGAGCGTGTGAACGCTCCGTTTTTGTTTC Look for more occurrences |
| Start | 21032 |
| End | 21071 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas chlororaphis strain EA105 contig_43, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AAGTAATCTCGACCT(5' tail) GAACGAAAAACGGAGCGT(5' stem) GTGA(loop) ACGCTCCGTTTTTGTTTC(3' stem) TGCCTTTTGCCTTTG(3' tail). Confidence: 95. opp_overlap 21042, overlap 21042 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|