| Internal ID | 18118521 | Source Database | TransTermHP TERM 87 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 87
|
| Sequence |
AAAAACCCCCGACAAACCAGAAGTCTGTCGGGGGTTTTC Look for more occurrences |
| Start | 262880 |
| End | 262918 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas sp. H1h Contig31, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | TTGACGGAGCAAAAG(5' tail) AAAAACCCCCGACAAAC(5' stem) CAGAA(loop) GTCTGTCGGGGGTTTTC(3' stem) TTTTGCCTGGAATGT(3' tail). Confidence: 100. opp_overlap 262885, overlap 262885 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|