Motif View

Internal ID 18112662
Source Database TransTermHP TERM 159
Feature Type terminator
Name
Rho-independent transcription terminator TERM 159
Sequence GGGCCCGTTCGGGCCC
Look for more occurrences
Start 470579
End 470594
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa PS50 adkgi-supercont1.2, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGGAACAATGAAAAA(5' tail) GGGCCC(5' stem) GTTC(loop) GGGCCC(3' stem) TTTTTCATTGCCGGA(3' tail). Confidence: 100. opp_overlap 470572 470579

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685