Internal ID | 18112566 | Source Database | TransTermHP TERM 19 |
Feature Type | terminator |
Name |
Rho-independent transcription terminator TERM 19
|
Sequence |
GCCCGGCATTCGCCGGGC Look for more occurrences |
Start | 99729 |
End | 99746 |
Strand | + |
Genomic Context | |
Replicon | Pseudomonas aeruginosa PS50 adkgi-supercont1.2, whole genome shotgun sequence. |
Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
Additional Comments | CAGAACCACGAAAAA(5' tail) GCCCGGC(5' stem) ATTC(loop) GCCGGGC(3' stem) TTTTTCGTTTTAATC(3' tail). Confidence: 100. opp_overlap 99722 99719 99729, overlap 99722 |
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|