Motif View

Internal ID 18109356
Source Database TransTermHP TERM 724
Feature Type terminator
Name
Rho-independent transcription terminator TERM 724
Sequence CCGGGCCTGGCGCCCGG
Look for more occurrences
Start 3290154
End 3290170
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA047 adkfX-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments AAAGGCATGAAAAAA(5' tail) CCGGGC(5' stem) GCCAG(loop) GCCCGG(3' stem) TTTCCGGTGTCGAAA(3' tail). Confidence: 100. opp_overlap 3290154

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685