Motif View

Internal ID 18107142
Source Database TransTermHP TERM 641
Feature Type terminator
Name
Rho-independent transcription terminator TERM 641
Sequence GCCCCGCGATTGCAGCTCCTGGTCGCGGGGC
Look for more occurrences
Start 2419487
End 2419517
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA044 adkfY-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCTGCGCATAAAAAA(5' tail) GCCCCGCGA-C-CAG(5' stem) GAG(loop) CTGCAATCGCGGGGC(3' stem) TGGAGTGGCCGATTT(3' tail). Confidence: 100. gap 2

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685