| Internal ID | 18106931 | Source Database | TransTermHP TERM 313 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 313
|
| Sequence |
CCCCGGCTCATGGCCGGGG Look for more occurrences |
| Start | 1220336 |
| End | 1220354 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa BWHPSA044 adkfY-supercont1.1, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGATGGAACGAAGAA(5' tail) CCCCGGCC(5' stem) ATG(loop) AGCCGGGG(3' stem) TTCTTCGTTCCTGAT(3' tail). Confidence: 91. opp_overlap 1220336 1220333 1220329 1220325, overlap 1220333 1220329 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|