| Internal ID | 18104953 | Source Database | TransTermHP TERM 5 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 5
|
| Sequence |
TGGCGGCGCCCTCTCTTTCCCCTGGGAAAGCGGGGGCGTCGCCG Look for more occurrences |
| Start | 33104 |
| End | 33147 |
| Strand | + |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa BWHPSA043 adkgk-supercont1.2, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | AGCCTTTCCACACCC(5' tail) TGGCGGCGCCCTCTCTTTCC(5' stem) CCTG(loop) GGAAAGCGGGGGCGTCGCCG(3' stem) TTTCCGGAGCGATCC(3' tail). Confidence: 100. opp_overlap 33134, overlap 33105 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|