Motif View

Internal ID 18104141
Source Database TransTermHP TERM 737
Feature Type terminator
Name
Rho-independent transcription terminator TERM 737
Sequence GGCCGCTGTTGCGGCC
Look for more occurrences
Start 3157543
End 3157558
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA042 adkfZ-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GCAACAAATTCAAAA(5' tail) GGCCGC(5' stem) TGTT(loop) GCGGCC(3' stem) TTTTTGAGCTCAGCG(3' tail). Confidence: 100. opp_overlap 3157537 3157543

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685