Motif View

Internal ID 18104139
Source Database TransTermHP TERM 735
Feature Type terminator
Name
Rho-independent transcription terminator TERM 735
Sequence GGCCGCTTACGCGGCC
Look for more occurrences
Start 3157369
End 3157384
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA042 adkfZ-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TAATGCCCGAGAAAA(5' tail) GGCCGC(5' stem) GTAA(loop) GCGGCC(3' stem) TTTTTATTGAAGCGA(3' tail). Confidence: 91. opp_overlap 3157369

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685