| Internal ID | 18102350 | Source Database | TransTermHP TERM 40 |
| Feature Type | terminator |
| Name |
Rho-independent transcription terminator TERM 40
|
| Sequence |
GAAAAAGGCCGGCGAATGCCGGCCTTTTTC Look for more occurrences |
| Start | 135962 |
| End | 135991 |
| Strand | - |
| Genomic Context | |
| Replicon | Pseudomonas aeruginosa BWHPSA040 adkfQ-supercont1.2, whole genome shotgun sequence. |
| Evidence |
ECO:0000246
computational combinatorial evidence used in automatic assertion
|
| Additional Comments | CACTGAGGCAAGAAT(5' tail) GAAAAAGGCCGGC(5' stem) ATTC(loop) GCCGGCCTTTTTC(3' stem) GTGGATCGTGCGGGC(3' tail). Confidence: 95. opp_overlap 135968, overlap 135961 135968 |
|
Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685
|