Motif View

Internal ID 18100634
Source Database TransTermHP TERM 75
Feature Type terminator
Name
Rho-independent transcription terminator TERM 75
Sequence CCATGCCCCCGGCGGAACGCCGCCGGGGGCATGG
Look for more occurrences
Start 508642
End 508675
Strand +
Genomic Context
Replicon Pseudomonas aeruginosa BWHPSA039 adkgf-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CGCCCAGTCCTGATC(5' tail) CCATGCCCCCGGCGG(5' stem) AACG(loop) CCGCCGGGGGCATGG(3' stem) TCTGTTTCTTGCCTG(3' tail). Confidence: 100. overlap 508640 508638

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685