Motif View

Internal ID 18095509
Source Database TransTermHP TERM 83
Feature Type terminator
Name
Rho-independent transcription terminator TERM 83
Sequence GGCGACCGGCGCCCGGGCGGCGCCGGTCGCG
Look for more occurrences
Start 367436
End 367466
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWH036 adTyH-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TCCGTCGGCGAGAAA(5' tail) CGCGACCGGCGCC(5' stem) GCCCG(loop) GGCGCCGGTCGCC(3' stem) GCTACCTCAGAAGTC(3' tail). Confidence: 100. overlap 367437

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685