Motif View

Internal ID 18095508
Source Database TransTermHP TERM 82
Feature Type terminator
Name
Rho-independent transcription terminator TERM 82
Sequence TCCGCGTTAAACTGCGCGGG
Look for more occurrences
Start 366672
End 366691
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWH036 adTyH-supercont1.1, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments GGAGAGAGGAAAAAA(5' tail) CCCGCGC(5' stem) AGTTTA(loop) ACGCGGA(3' stem) ATTGGCGGTCACGCT(3' tail). Confidence: 91. overlap 366673

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685