Motif View

Internal ID 18094094
Source Database TransTermHP TERM 45
Feature Type terminator
Name
Rho-independent transcription terminator TERM 45
Sequence CGCGGCCGGTGCAGCGATGCACCGGCCGCG
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Start 139479
End 139508
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa BWH032 adTys-supercont1.12, whole genome shotgun sequence.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTGCGGGTAAGACGA(5' tail) CGCGGCCGGTGCA(5' stem) TCGC(loop) TGCACCGGCCGCG(3' stem) CGGAGACTCAGGCCT(3' tail). Confidence: 100. overlap 139476

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685